Job Description Q9VGK8 Confidence 100.00% Date Wed Feb 13 11:19:23 GMT 2013 Rank 47 Aligned Residues 243 % Identity 25% Template c4fieB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: full-length human pak4 Resolution 3.11 Å

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		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.			.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																											.	.											.	.
Query SS confidence																											.	.											.	.
Query Sequence		P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	.	.	N	E	K	V	A	V	K	M	L	K	.	.	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L	V	T	E
Query Conservation																											.	.											.	.
Alig confidence																											.	.											.	.
Template Conservation
Template Sequence		P	R	S	Y	L	D	N	F	I	K	I	G	E	G	S	T	G	I	V	C	I	A	T	V	R	S	S	G	K	L	V	A	V	K	K	M	D	L	R	K	Q	Q	R	R	E	L	L	F	N	E	V	V	I	M	R	D	Y	Q	H	E	N	V	V	E	M	Y	N	S	Y	L	V	G	D	E	L	W	V	V	M	E
Template Known Secondary structure		G	G	G	T											S	S									T	T	T											S	T	T		S	S	G	G	G														T	T	B										T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y	N	L	.	.	D	V
Query Conservation																																																																														.	.
Alig confidence																	.	.	.																																																											.	.
Template Conservation																	.	.	.
Template Sequence		F	L	E	G	G	A	L	T	D	I	V	T	H	T	R	.	.	.	M	N	E	E	Q	I	A	A	V	C	L	A	V	L	Q	A	L	S	V	L	H	A	Q	G	V	I	H	R	D	I	K	S	D	S	I	L	L	T	H	D	G	R	V	K	L	S	D	F	G	F	C	A	Q	V	S	K	E	V	P	R	R	K
Template Known Secondary structure				T	T										S		.	.	.																							T	T							S	T	T	T					T	T									T	T						S	S				B
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		703	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.			.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		G	K	L	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	P	E	G	.	.	C	P	P	E	I	Y	E	M	M	R	Q	A	W
Query Conservation																																																																			.	.
Alig confidence																																						.																													.	.
Template Conservation																																						.
Template Sequence		L	V	G	T	P	Y	W	M	A	P	E	L	I	S	R	L	P	Y	G	P	E	V	D	I	W	S	L	G	I	M	V	I	E	M	V	D	.	G	E	P	P	Y	F	N	E	P	P	L	K	A	M	K	M	I	R	D	N	L	P	P	R	L	K	N	L	H	K	V	S	P	S	L	K	G	F	L	D	R	L	L
Template Known Secondary structure						T	T	T							T	T			B		T																	.	S	S		T	T	T	T	S												S						S		T	T	S	S												S
Template Predicted Secondary structure																																						.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	N	P	A	K	R	P	T	F	A	E	L	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	D	P	A	Q	R	A	T	A	A	E	L	L	K
Template Known Secondary structure			S	S	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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