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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank207Aligned Residues233
% Identity28%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   548.550.........560.........570... ......580... ......590.........600.........610.........620....
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Query Sequence  IPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME
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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   625....630.........640.........650.........660.........670.........680.. .......690.........700..
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISED. . CVAKVSDFGLAREECYNLDV
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Template Sequence  YASGGELFERICNAGR. . FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYTP. . . . . . . .
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   96...100.........110. ........120.........130.........140.........150.........160.....
 
   703......710.........720.........730.........740........ .750.........760 .........770.......
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIP. . . . LADVVKHVEVGY. KMEAPEGCPPEIYEMMR
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Template Sequence  . . . . AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS
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   181........190.........200.........210.. .......220.........230.........240.........250.....
 
   778.780.........790.....
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Query Sequence  QAWDLNPAKRPTFAELKV
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Template Sequence  RIFVADPAKRISIPEIRN
Template Known Secondary structure  S
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   256...260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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