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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank223Aligned Residues243
% Identity23%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   551........560.........570... ......580....... ..590.........600. ........610.........620..
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGA. . . . . VQKFLAEASVMTTL. EHDNLVKFIGLVFTSKHLYLV
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV
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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   623......630.........640.........650.........660.........670.........680.........690.........700..
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Query Sequence  TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDV
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Template Sequence  MEFVNGGDLMFHIQKSRR. . FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI. . . . .
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   433......440.........450 .........460.........470.........480.........490.........500.....
 
   703......710.........720.........730.........740.........750.........760.........770.........780..
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDL
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Template Sequence  . CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSFMTK
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   506...510.........520.........530.........540 .........550.........560 .........570.........580..
 
   783......790.........800...
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Query Sequence  NPAKRPTFAELKVKLQLLNNA
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Template Sequence  NPTMRLGSLTQGGEHAILRHP
Template Known Secondary structure  SGGGSTTSGGGT
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   592.......600.........610..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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