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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank171Aligned Residues243
% Identity26%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   551........560.........570... ......580....... ..590.........600.........610.........620.....
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGA. . . VQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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TTT

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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   626...630.........640.........650.........660.........670......... 680.........690.........700..
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLI. . . SEDCVAKVSDFGLAREECYNLDV
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Template Sequence  YTGGELFDEIIKRKR. . FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ. . . . .
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   155....160......... 170.........180.........190.........200.........210.........220.......
 
   703......710.........720.........730.........740.........750......... 760.........770.........
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVG. . . YKMEAPEGCPPEIYEMMRQA
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Template Sequence  . QNTTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKM
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GGG

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   228.230.........240.........250.........260.. .......270.........280.........290.........300.....
 
   780.........790.........800..
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Query Sequence  WDLNPAKRPTFAELKVKLQLLNN
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Template Sequence  LTFHPSLRITATQCLEHPWIQKY
Template Known Secondary structure  T
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   313......320.........330.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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