Job Description Q9VGK8 Confidence 100.00% Date Wed Feb 13 11:19:23 GMT 2013 Rank 65 Aligned Residues 244 % Identity 28% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		557	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure												.																																				.
Query SS confidence												.																																				.
Query Sequence		E	S	I	G	K	G	E	F	G	D	.	V	M	L	G	I	L	R	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	.	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L	V	T	E	Y	M	S	K	G	S	L	V	D	Y
Query Conservation												.																																				.
Alig confidence												.																		.																		.																											.
Template Conservation																														.																																													.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	Q	G	R	P	V	A	V	K	R	M	L	.	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q	D	L
Template Known Secondary structure								T	T	T								S	S	S										.	G	G	G															T	T	S	T	T	B										T	T										S	.
Template Predicted Secondary structure																														.																																													.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.		.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.						.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.														.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	S	R	G	R	Q	H	I	T	K	K	D	.	.	.	.	.	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	V	S	D	F	G	L	A	R	E	E
Query Conservation															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K	K	L
Template Known Secondary structure			T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S							B				S	S
Template Predicted Secondary structure
Template SS confidence
		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.
		697	.	.					700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.				.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760							.	.	.
Predicted Secondary structure					.	.	.	.																			.	.	.																																												.	.	.	.	.	.
Query SS confidence					.	.	.	.																			.	.	.																																												.	.	.	.	.	.
Query Sequence		C	Y	N	.	.	.	.	L	D	V	G	K	L	P	I	K	W	T	A	P	E	A	L	K	N	.	.	.	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	.	.	.	.	.	.	K	M	E
Query Conservation					.	.	.	.																			.	.	.																																												.	.	.	.	.	.
Alig confidence					.	.	.	.																			.	.	.																														.	.													.	.	.	.	.	.
Template Conservation																																																											.	.
Template Sequence		D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	D	.	.	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M	K	C	L
Template Known Secondary structure		T	T	T									S	G	G	G	G	G							S	T	T	T						T																T	T	S			T	T		S	.	.											T								T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		836	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.			.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.										.	.	.	.	.	800	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q	A	W	D	L	N	P	A	K	R	P	T	F	A	E	L	K	.	.	.	.	.	.	.	.	.	V	K	L	Q	L	L	N	N	A	T
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R	H	P	L	F	W	P	K	S	K	K	L	E	F	L	L	K	V	S
Template Known Secondary structure																		T		S	S	T	T	T	S								T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		945	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions