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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank82Aligned Residues244
% Identity28%Templatec3comB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 4; PDBTitle: crystal structure of mst1 kinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   546...550.........560.........570... ......580.........590.........600.........610.........620...
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Query Sequence  WVIPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVT
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Template Sequence  TKQPEEVFDVLEKLG. . . . GSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM
Template Known Secondary structure  TS


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   23......30....... ..40.........50.........60.........70.........80.........90........
 
   624.....630.........640.........650.........660.........670.........680.........690.........700. .
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Query Sequence  EYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLD. V
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Template Sequence  EYCGAGSVSDIIRLRNK. TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDMAKRN
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TTT
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SGGG
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SB
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   103......110......... 120.........130.........140.........150.........160.........170.........180.
 
   703......710.........720.........730.........740.........750.........760.... .....770.........780
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEA. . PEGCPPEIYEMMRQAW
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Template Sequence  VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE. GKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL
Template Known Secondary structure 

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GGG

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B
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   184.....190.........200.........210......... 220.........230.........240.........250.........260..
 
   781........790.....
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Query Sequence  DLNPAKRPTFAELKV
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Template Sequence  VKSPEQRATATQLLQ
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   263......270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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