Job Description Q9VGK8 Confidence 100.00% Date Wed Feb 13 11:19:23 GMT 2013 Rank 215 Aligned Residues 221 % Identity 26% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.						.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		V	I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	.	.	.	.	.	R	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	H	P	F	I	V	D	L	I	Y	A	F	Q	T	G	G	K	L	Y	L
Template Known Secondary structure					G	G	G											S	S	S									S	S	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B										S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y	N	L	D
Query Conservation
Alig confidence																					.	.																																																				.	.	.	.	.	.	.
Template Conservation																					.	.																																																				.	.	.	.	.	.	.
Template Sequence		I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	G	I	.	.	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G	H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G	L	C	.	.	.	.	.	.	.	K
Template Known Secondary structure							T	T	T	T	S								T		.	.																							T	T				S				G	G	G					T	T					B				T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																																																				.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	K	L	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q	A	W	D
Query Conservation
Alig confidence																																							.																				.
Template Conservation																																							.																				.
Template Sequence		E	S	C	G	T	I	E	Y	M	A	P	E	I	L	M	R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	T	.	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	.	C	K	L	N	L	P	P	Y	L	T	Q	E	A	R	D	L	L	K	K	L	L	K
Template Known Secondary structure								T	T	S						T	T	T	T	S	S	T																	.	S	S		T	T			S	S											.							S	S	S												S
Template Predicted Secondary structure																																							.																				.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		782	.	.	.	.	.	.	.						790	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		L	N	P	A	K	R	P	T	.	.	.	.	.	F	A	E	L	K	V
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		R	N	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A
Template Known Secondary structure		S		T	T	T	S	T	T		S	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions