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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank118Aligned Residues239
% Identity23%Templatec2r5tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase sgk1; PDBTitle: crystal structure of inactive serum and glucocorticoid-2 regulated kinase 1 in complex with amp-pnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   548.550.........560.........570... ......580.........590.........600.........610.........620.....
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Query Sequence  IPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKK. . . . . . . AILVLLKNVKHPFLVGLHFSFQTADKLYFVLDY
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GGG

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   93......100.........110.........120.........130.. .......140.........150.........160.....
 
   626...630.........640.........650.........660.........670.........680.........690.... .....700..
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR. . . EECYNLDV
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Template Sequence  INGGELFYHLQRERC. . FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST
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BSS..

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   179180.........190... ......200.........210.........220.........230.........240.........250......
 
   703......710.........720.........730.........740.........750.........760.........770.........780..
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Query Sequence  GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDL
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Template Sequence  FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY. GLPPFYSRNTAEMYDNILNK. PLQLKPNITNSARHLLEGLLQK
Template Known Secondary structure  BS






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   257..260.........270.........280.........290.. .......300.........310.. .......320.........330....
 
   783......790.......
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Query Sequence  NPAKRPTFAELKVKL
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Template Sequence  DRTKRLGAKDDFMEI
Template Known Secondary structure  SGGGSTTTTTT
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   335....340.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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