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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank75Aligned Residues242
% Identity23%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   550.........560.........570... ......580....... ..590.........600.........610.........620.....
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Query Sequence  EAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGA. . VQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEY
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Template Sequence  NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL
Template Known Secondary structure  TTTTT

TTT
S
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BTTB


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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   626...630.........640.........650.........660.........670......... 680.........690.... .....700
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Query Sequence  MSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLI. . . SEDCVAKVSDFGLAR. . EECYNL
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Template Sequence  CTGGELFERVVHKRV. . FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM
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SGGGGGTTTSS..

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SGGGSSSSTT




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TT

B
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   105....110......... 120.........130.........140.........150.........160.........170.........180..
 
   701........710.........720.........730.........740.........750.........760..... ....770........
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Query Sequence  DVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAP. . EGCPPEIYEMMRQ
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Template Sequence  RTKVGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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   183......190.........200 .........210......... 220.........230.........240.........250.........260
 
   779780.........790.....
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Query Sequence  AWDLNPAKRPTFAELKV
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   262.......270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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