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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank157Aligned Residues240
% Identity25%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   551........560.........570... ......580....... ..590.........600. ........610.........620..
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGA. . . . . VQKFLAEASVMTTL. EHDNLVKFIGLVFTSKHLYLV
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV
Template Known Secondary structure  TTTTTTSS
T
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TTB

TT
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   623......630.........640.........650.........660.........670.........680.........690.........700
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Query Sequence  TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNL. .
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Template Sequence  MEYVNGGDLMYHIQQVGR. . FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT
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BTTSS..

TT
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SGGG
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TT
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   420.........430....... ..440.........450.........460.........470.........480.........490.......
 
   701........710.........720.........730.........740.........750.........760.........770.........780
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Query Sequence  DVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAW
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Template Sequence  TKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIME. HNVAYPKSMSKEAVAICKGLM
Template Known Secondary structure  B


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TTT

TT

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   498.500.........510.........520.........530..... ....540.........550.... .....560.........570.....
 
   781........ 790....
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Query Sequence  DLNPAKRPT. . . . . FAELK
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Template Sequence  TKHPGKRLGCGPEGERDIK
Template Known Secondary structure 
SSGGGSTT
STT
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   577..580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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