Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank161Aligned Residues238
% Identity26%Templatec2cn5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: crystal structure of human chk2 in complex with adp
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   550.........560.........570... ......580.........590.........600.........610.........620.......
Predicted Secondary structure 



..













Query SS confidence 























. .





















































Query Sequence  EAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMS
Query Conservation           

 
 

 
      ..    
 
             
      
 
  

              
 
   
Alig confidence 























..










....






















.














Template Conservation     
     

 
 

 

 
    
    


 
  ....     

  
  
 




    .         
     
Template Sequence  RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISK. . . . RNVETEIEILKKLNHPCIIKIKN. FFDAEDYYIVLELME
Template Known Secondary structure 
SSTTTT
....




TTB

.SS

T
Template Predicted Secondary structure 











....










.







Template SS confidence 















































































   217..220.........230.........240.........250... ......260.........270...... ...280.........290.
 
   628.630.........640.........650.........660.........670.........680. ........690.........700 ..
Predicted Secondary structure 


















...














..

Query SS confidence 





















































. . .


















. .

Query Sequence  KGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISE. . . DCVAKVSDFGLAREECYNL. . DV
Query Conservation   
 
   
                          

     
 


  


   ...    

 


         ..  
Alig confidence 












..






































...


















..

Template Conservation   
 
         ..            
   
   
     
                      
 
             
Template Sequence  GGELFDKVVGNKR. . LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT
Template Known Secondary structure  T
BGGGGT
TT

..

TT




GGGSSSSSS




TT



Template Predicted Secondary structure 












..










































Template SS confidence 















































































   306...310........ .320.........330.........340.........350.........360.........370.........380...
 
   703......710....... ..720.........730.........740..... ....750.........760..... ....770.....
Predicted Secondary structure 






...










.









...



Query SS confidence 














. . .



























.



















. . .









Query Sequence  GKLPIKWTAPEALKN. . . GRFSNKSDMWSFGILLWEIYSFGRVPYP. RIPLADVVKHVEVGYKMEAP. . . EGCPPEIYEM
Query Conservation          


    ...       
  
 
    
    
  
  .                   
...         
Alig confidence 














...




















.





.



















...









Template Conservation           

              











 
.
  

            
               
     
Template Sequence  LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL
Template Known Secondary structure  TS
GGG

TTTTTT
TT.SS
SS
SSS

S
T




TTS
Template Predicted Secondary structure 
















.





















Template SS confidence 















































































   384.....390.........400.........410.........420.. .......430.........440.........450.........460..
 
   776...780.........790.....
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  MRQAWDLNPAKRPTFAELKV
Query Conservation     
    
  

    
  
Alig confidence 



















Template Conservation 
   
  

  
 
  


 
Template Sequence  VKKLLVVDPKARFTTEEALR
Template Known Secondary structure  S
SSTTTS

T
Template Predicted Secondary structure 







Template SS confidence 



















   463......470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions