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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank55Aligned Residues233
% Identity24%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   546...550.........560.........570... ......580... ......590.........600.........610........
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Query Sequence  WVIPEAELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKH
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Template Sequence  WAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR
Template Known Secondary structure 

G..GG
SSTTT

TT
TT


TTB


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   128.130 .........140.........150.........160.........170.........180.........190.........200.....
 
   619620.........630.........640.........650.........660.........670.........680.........690........
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Query Sequence  LYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECY
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Template Sequence  VYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . .
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TT
BSS..

TTT




GGG
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S

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   206...210.........220....... ..230.........240.........250.........260.........270........
 
   699700.........710.........720.........730.........740.........750.........760.........770........
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Query Sequence  NLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQ
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Template Sequence  . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDLISR
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GGG

GGGTTTTSSGGG.SS
TT

SSTT
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   279280.........290.........300.........310.. .......320.........330... ......340.........350
 
   779780.........790.....
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Query Sequence  AWDLNPAKRPTFAELKV
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Template Sequence  LLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   363......370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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