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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank87Aligned Residues242
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   551........560.........570... ......580... ......590.........600.........610.........620....
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Query Sequence  AELQLRESIGKGEFGDVMLGILR. . NEKVAVKMLK. . . . DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE
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Template Sequence  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD
Template Known Secondary structure  TTTTTTT


SS




TTB


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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   625....630.........640.........650.........660.........670.........680 .........690.........700
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Query Sequence  YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLIS. . . EDCVAKVSDFGLAREECYNL.
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Template Sequence  LVTGGELFEDIVAREF. . YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA
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S
BTT
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B



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TT
B

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   91........100...... ...110.........120.........130.........140.........150.........160........
 
   701........710.........720.........730.........740.........750.........760. ........770......
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Query Sequence  . DVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYK. . . MEAPEGCPPEIYEMM
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Template Sequence  WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI
Template Known Secondary structure 


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   170.........180.........190.........200........ .210.........220.........230.........240........
 
   777..780.........790.....
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Query Sequence  RQAWDLNPAKRPTFAELKV
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Template Sequence  DSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   249250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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