Job Description Q9VGK8 Confidence 100.00% Date Wed Feb 13 11:19:23 GMT 2013 Rank 124 Aligned Residues 252 % Identity 34% Template c1xkkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:epidermal growth factor receptor; PDBTitle: egfr kinase domain complexed with a quinazoline inhibitor-2 gw572016 Resolution 2.40 Å

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		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		V	I	P	E	A	E	L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	.	.	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	L	Y	L	V	T	E
Query Conservation																													.	.
Alig confidence																													.	.												.																																			.
Template Conservation																																										.																																			.
Template Sequence		I	L	K	E	T	E	F	K	K	I	K	V	L	G	S	G	A	F	G	T	V	Y	K	G	L	W	I	P	V	K	I	P	V	A	I	K	E	L	R	E	.	K	A	N	K	E	I	L	D	E	A	Y	V	M	A	S	V	D	N	P	H	V	C	R	L	L	G	I	C	L	T	S	T	V	Q	.	L	I	T	Q
Template Known Secondary structure					T	T	T											S	S																							.		T																	T	T	B									S	S	S			.
Template Predicted Secondary structure																																										.																																			.
Template SS confidence
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.		.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.		780	.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	S	K	G	S	L	V	D	Y	L	R	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y	N	L	D	V	G	K
Query Conservation
Alig confidence																.																																																								.	.	.
Template Conservation																.																																																								.	.	.
Template Sequence		L	M	P	F	G	C	L	L	D	Y	V	R	E	H	.	K	D	N	I	G	S	Q	Y	L	L	N	W	C	V	Q	I	A	K	G	M	N	Y	L	E	D	R	R	L	V	H	R	D	L	A	A	R	N	V	L	V	K	T	P	Q	H	V	K	I	T	D	F	G	L	A	K	.	.	.	L	L	G	A	E	E	K
Template Known Secondary structure				T	T		B								T	.	S	S	S																							T	T				S				G	G	G						T	T								S				.	.	.		T	T	T	T
Template Predicted Secondary structure																.																																																								.	.	.
Template SS confidence
		792	.	.	.	.	.	.	.	800	.	.	.	.	.		.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860				.	.	.	.	.	.	.
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q	A	W	D	L	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	I	K	W	M	A	L	E	S	I	L	H	R	I	Y	T	H	Q	S	D	V	W	S	Y	G	V	T	V	W	E	L	M	T	F	G	S	K	P	Y	D	G	I	P	A	S	E	I	S	S	I	L	E	K	G	E	R	L	P	Q	P	P	I	C	T	I	D	V	Y	M	I	M	V	K	C	W	M	I	D	A
Template Known Secondary structure				T	T	T	S																												T	T	S			T	T	T	T	S		G	G	G								T							T	T	B												T		S	S	G
Template Predicted Secondary structure
Template SS confidence
		876	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	P	T	F	A	E	L	K	V	K	L	Q	L	L	N	N	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	R	P	K	F	R	E	L	I	I	E	F	S	K	M	A	R	D	P
Template Known Secondary structure		G	G	S																S
Template Predicted Secondary structure
Template SS confidence
		956	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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