Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VGK8
Confidence98.04%DateWed Feb 13 11:19:23 GMT 2013
Rank372Aligned Residues98
% Identity35%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450. ........460.........470.........480......... 490.........500..
Predicted Secondary structure 












..





























......












Query SS confidence 




















. .





































. . . . . .












Query Sequence  KLNAMPWFHGSITRDEAEHLL. . QPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYL. . . . . . ENKLTIDDEEYFE
Query Conservation                      
..          
                           ......             
Alig confidence 




















..





































......












Template Conservation 


   

 
 


 


  

      
 



 
      
 


          
                    
 
Template Sequence  SLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFP
Template Known Secondary structure 
STTSTTB
SS

TSSS

TT
SSSTT

SSS

TTS
SSTT

BS
Template Predicted Secondary structure 







































Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   503......510.........520........
Predicted Secondary structure 
















Query SS confidence 

























Query Sequence  NLGQLVAHYEADADGLCTQLIKCLPK
Query Conservation                            
Alig confidence 

























Template Conservation 

  

  
      
   
  

  
Template Sequence  GLHELVRHYTNASDGLCTRLSRPCQT
Template Known Secondary structure  S

SSSSS





Template Predicted Secondary structure 













Template SS confidence 

























   201........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions