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Job DescriptionQ9VGK8
Confidence100.00%DateWed Feb 13 11:19:23 GMT 2013
Rank2Aligned Residues379
% Identity60%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   416...420.........430.........440.........450.........460.........470.........480.........490.....
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Query Sequence  PTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTI
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Template Sequence  PANYVQKREGVKAGTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSI
Template Known Secondary structure  GGG





SSSS
TTB

S

T
S

TT

SSSTT
TTTTS
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   61........70.........80.........90.........100.........110.........120.........130.........140
 
   496...500.........510.........520.........530.........540.........550.........560.........570.....
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Query Sequence  DDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILRNE
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Template Sequence  DEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQ. . . DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN
Template Known Secondary structure  SSSS
BSS

TTSSS


SB


SS
...TT
B

GGG

TTTT
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   141........150.........160.........170.........180 .........190.........200.........210.......
 
   576...580.........590.........600.........610....... ..620.........630.........640.........650....
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Query Sequence  KVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSK. HLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYD
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Template Sequence  KVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD
Template Known Secondary structure  SS
TTSTT


TTB


SSS



TT
B
TTT

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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   655....660.........670.........680.........690.........700.........710.........720.........730....
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Query Sequence  TASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLW
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Template Sequence  VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAG. . . . . . KLPVKWTAPEALREKKFSTKSDVWSFGILLW
Template Known Secondary structure  TT
B
S


GGG
TT




TT
B


......


TTTS
TTT


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   298.300.........310.........320.........330.........340 .........350.........360.........370.
 
   735....740.........750.........760.........770.........780.........790.........800...
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Query Sequence  EIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNNA
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Template Conservation 

 
 
  

      
    
  
 
   
   
  
  

  
   

  


   
   
  
   
Template Sequence  EIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH
Template Known Secondary structure  TTT

SSTTS
TTTTTT





TT

T
SSGGGS

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   378.380.........390.........400.........410.........420.........430.........440......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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