Job Description Q9VGK8 Confidence 100.00% Date Wed Feb 13 11:19:23 GMT 2013 Rank 264 Aligned Residues 240 % Identity 21% Template c1gngA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: glycogen synthase kinase-3 beta (gsk3) complex with frattide2 peptide Resolution 2.6 Å

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		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.							.	620	.	.	.	.
Predicted Secondary structure																							.	.																																														.	.	.	.	.	.
Query SS confidence																							.	.																																														.	.	.	.	.	.
Query Sequence		L	Q	L	R	E	S	I	G	K	G	E	F	G	D	V	M	L	G	I	L	R	.	.	N	E	K	V	A	V	K	M	L	K	D	E	G	A	V	Q	K	F	L	A	E	A	S	V	M	T	T	L	E	H	D	N	L	V	K	F	I	G	L	V	F	T	S	K	H	.	.	.	.	.	.	L	Y	L	V	T	E
Query Conservation																							.	.																																														.	.	.	.	.	.
Alig confidence																							.	.														.	.																															.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		Y	T	D	T	K	V	I	G	N	G	S	F	G	V	V	Y	Q	A	K	L	C	D	S	G	E	L	V	A	I	K	K	V	L	Q	D	K	.	.	R	F	K	N	R	E	L	Q	I	M	R	K	L	D	H	C	N	I	V	R	L	R	Y	F	F	Y	S	S	G	E	K	K	D	E	V	Y	L	N	L	V	L	D
Template Known Secondary structure											S	S	S									T	T	T													T	.	.	T	S														T	T	B												S	S	T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		625	.	.	.	.	630	.	.	.	.	.	.		.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.		.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
Predicted Secondary structure														.																																.
Query SS confidence														.																																.
Query Sequence		Y	M	S	K	G	S	L	V	D	Y	L	R	.	S	R	G	R	Q	H	I	T	K	K	D	Q	I	I	F	A	Y	D	T	A	S	G	M	E	Y	L	E	A	K	K	V	.	V	H	R	D	L	A	A	R	N	V	L	I	S	E	D	C	V	A	K	V	S	D	F	G	L	A	R	E	E	C	Y	N	L	D	V
Query Conservation														.																																.
Alig confidence														.																																.
Template Conservation
Template Sequence		Y	V	P	E	T	V	Y	R	V	A	R	H	Y	S	R	A	K	Q	T	L	P	V	I	Y	V	K	L	Y	M	Y	Q	L	F	R	S	L	A	Y	I	H	S	F	G	I	C	H	R	D	I	K	P	Q	N	L	L	L	D	P	D	T	A	V	L	K	L	C	D	F	G	S	A	K	Q	L	V	R	G	E	P	N
Template Known Secondary structure						B											T	T	S																								T	T				S				G	G	G					T	T	T								T	T	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		703	.	.			.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.
Predicted Secondary structure					.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	L	.	.	P	I	K	W	T	A	P	E	A	L	K	N	G	R	F	S	N	K	S	D	M	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	A	D	V	V	K	H	V	E	V	G	Y	K	M	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																																		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		V	S	I	C	S	R	Y	Y	R	A	P	E	L	I	F	G	A	T	D	Y	T	S	S	I	D	V	W	S	A	G	C	V	L	A	E	L	L	L	.	G	Q	P	I	F	P	G	D	S	G	V	D	Q	L	V	E	I	I	K	V	L	G	T	P	T	R	E	Q	I	R	E	M	N	P	N	Y	T	E	F	K	F
Template Known Secondary structure							G	G	G							T	T		S	S			T																	.	S	S		S				S	S														S											T	T				S
Template Predicted Secondary structure																																								.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
														765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	E	G	C	P	P	E	I	Y	E	M	M	R	Q	A	W	D	L	N	P	A	K	R	P	T	F	A	E	L	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	I	K	A	H	P	W	T	K	V	F	R	P	R	T	P	P	E	A	I	A	L	C	S	R	L	L	E	Y	T	P	T	A	R	L	T	P	L	E	A	C	A
Template Known Secondary structure													S		T	T	S												S		S	S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions