Return to main results Retrieve Phyre Job Id

Job DescriptionQ9V9J3
Confidence100.00%DateTue Jan 22 11:49:10 GMT 2013
Rank152Aligned Residues250
% Identity22%Templatec4dc2A_
PDB info PDB header:transferase/transferase substrateChain: A: PDB Molecule:protein kinase c iota type; PDBTitle: structure of pkc in complex with a substrate peptide from par-3
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260........ .270.........280.........290........ .300.........310.........320
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Query Sequence  IDRTSLKFVRKLGSGQFGDVWEGLWN. NTTPVAIKTLKSGTMDPKDFLAEAQIMKKL. RHTKLIQLYAVCTVEEPIYIIT
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI
Template Known Secondary structure 

GGG
SSTTTTGGGT


TT
TTB


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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  ELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEY
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Template Sequence  EYVNGGDLMFHMQRQRK. . . . LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD
Template Known Secondary structure 

TT
BSS....

TT
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GGG
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TT
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TT
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   323......330......... 340.........350.........360.........370.........380.........390........
 
   401........410.........420.........430.........440.........450. ........460.........470........
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Query Sequence  EARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMT. . NAEVLTQVEHGYRMPQPPNCEPRLYEI
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Template Sequence  TTSTFCGTP. NYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDIVGSNTEDYLFQVILEKQIRIPRSLSVKAASV
Template Known Secondary structure 
B



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G.GG

TT

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   399400....... ..410.........420.........430........ .440.........450.........460.........470......
 
   479480.........490. .......
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Query Sequence  MLECWHKDPMRRP. . . . . . TFETLQW
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Template Sequence  LKSFLNKDPKERLGCHPQTGFADIQG
Template Known Secondary structure  T
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TTTSTT
STTT
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   483......490.........500........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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