Return to main results Retrieve Phyre Job Id

Job DescriptionQ9V9J3
Confidence100.00%DateTue Jan 22 11:49:10 GMT 2013
Rank223Aligned Residues267
% Identity23%Templatec3tacA_
PDB info PDB header:transferase/protein bindingChain: A: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: crystal structure of the liprin-alpha/cask complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260........ .270........ .280.........290.........300..
Predicted Secondary structure 






















.


......










Query SS confidence 






































.









. . . . . .























Query Sequence  TEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWN. NTTPVAIKTL. . . . . . KSGTMDPKDFLAEAQIMKKLRHTK
Query Conservation              

      
   

 
 

 
      .    



 
......         
  
   
  
 


Alig confidence 






































.









......























Template Conservation       
            
 
   

 
 

 

 
        



 
                  
  

  
 
 
Template Sequence  SSGLVPSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH
Template Known Secondary structure 










SS

SSTTT

TSTT




TT
Template Predicted Secondary structure 
































Template SS confidence 















































































  
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions