Job Description Q9V9J3 Confidence 100.00% Date Tue Jan 22 11:49:10 GMT 2013 Rank 299 Aligned Residues 227 % Identity 23% Template c3rnyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	N	T	T	P	V	A	I	K	T	L	K	S	G	T	M	D	P	K	D	F	L	A	E	A	Q	I	M	K	K	L	.	R	H	T	K	L	I	Q	L	Y	A	V	C	T	V	E	E	P	I	Y	I	I	T	E	L	M	K	H	G	S	L	L	E	Y	L	Q	A	I	A	G	K	G	R	S	L	K	M	Q	T
Query Conservation																																	.
Alig confidence														.	.	.	.	.	.	.													.													.	.	.	.	.	.																	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																										.	.	.	.	.	.																	.	.	.	.
Template Sequence		V	H	N	M	E	Y	A	V	K	V	I	D	.	.	.	.	.	.	.	K	P	S	E	E	I	E	I	L	L	R	Y	G	Q	H	P	N	I	I	T	L	K	D	V	Y	.	.	.	.	.	.	D	L	V	T	E	L	M	R	G	G	E	L	L	D	K	I	.	.	.	.	L	R	Q	K	F	F	S	E	R	E
Template Known Secondary structure														.	.	.	.	.	.	.													T	T	S	T	T	B								.	.	.	.	.	.									S		B						.	.	.	.	T	S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																										.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.								.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.							.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.					.	490	.	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	M	A	A	Q	I	A	A	G	M	A	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	D	G	N	I	V	K	I	A	D	F	G	L	A	R	L	I	K	E	D	E	Y	E	A	R	V	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	S	K	F	S	I	K
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		A	S	F	V	L	H	T	I	G	K	T	V	E	Y	L	H	S	Q	G	V	V	H	R	D	L	K	P	S	N	I	L	Y	V	D	E	S	G	N	P	E	C	L	R	I	C	D	.	.	.	F	G	F	A	K	Q	L	R	A	E	N	G	L	L	M	T	P	C	Y	T	E	V	L	K	R	Q	G	Y	D	E	G
Template Known Secondary structure																			T	T				S				G	G	G				S	S	T	T			G	G	G						.	.	.		T	T					B		S	S			B			G	G	G
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.				.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.				.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																						.	.	.																															.	.
Query SS confidence																							.	.	.																						.	.	.																															.	.
Query Sequence		S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	Y	G	R	I	P	Y	.	.	.	P	G	M	T	N	A	E	V	L	T	Q	V	E	H	G	Y	R	M	P	Q	P	.	.	.	P	N	C	E	P	R	L	Y	E	I	M	L	E	C	W	H	K	D	P	M	R	R	P	T	F	E	T	L	Q	W	.	.
Query Conservation																							.	.	.																						.	.	.																															.	.
Alig confidence																	.						.	.	.																						.	.	.																															.	.
Template Conservation																	.
Template Sequence		C	D	I	W	S	L	G	I	L	L	Y	T	M	L	A	.	G	Y	T	P	F	A	N	G	P	S	D	T	P	E	E	I	L	T	R	I	G	S	G	K	F	T	L	S	G	G	N	W	N	T	V	S	E	T	A	K	D	L	V	S	K	M	L	H	V	D	P	H	Q	R	L	T	A	K	Q	V	L	Q	H	P
Template Known Secondary structure																	.	S	S		S	S		S	S	T	T													T						S	G	G	G	G	G	S												S		S	S	T	T	S	S							T	T	S
Template Predicted Secondary structure																	.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	D	F	Y	T	S	D	Q	S	D	Y	K	E	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	V	T	Q	K	D	K	L	P	Q	S	Q	L	S	H	Q	D
Template Known Secondary structure						G	G	G	S			S
Template Predicted Secondary structure
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions