Job Description Q9V9J3 Confidence 99.53% Date Tue Jan 22 11:49:10 GMT 2013 Rank 428 Aligned Residues 77 % Identity 27% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																			.											.	.	.	.	.	.
Query SS confidence																																																			.											.	.	.	.	.	.
Query Sequence		E	P	W	Y	F	R	K	I	K	R	I	E	A	E	K	K	L	L	L	P	E	N	E	H	G	A	F	L	I	R	D	S	E	S	R	H	N	D	Y	S	L	S	V	R	D	G	D	T	V	.	K	H	Y	R	I	R	Q	L	D	E	.	.	.	.	.	.	G	G	F	F	I	A	R	R	T	T	F	R	T	L
Query Conservation																																																			.											.	.	.	.	.	.
Alig confidence							.												.	.																															.											.	.	.	.	.	.
Template Conservation							.												.	.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	.	.	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure			T	T			.												.	.	T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure							.												.	.
Template SS confidence
		6	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		201	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	V	E	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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