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Job DescriptionQ9V9J3
Confidence100.00%DateTue Jan 22 11:49:10 GMT 2013
Rank75Aligned Residues240
% Identity28%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260........ .270.........280.........290.........300.........310.........320....
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Query Sequence  TSLKFVRKLGSGQFGDVWEGLWN. NTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMK
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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TTB


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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   325....330.........340.........350.........360.........370........ .380.........390.........400.
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Query Sequence  HGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLV. . . GDGNIVKIADFGLARLIKEDEYE
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Template Sequence  GGELFDEIIHRMK. . . . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM
Template Known Secondary structure  S
BSS....

TT
S

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TT

BTTB
B
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   143......150..... ....160.........170.........180.........190.........200.........210........
 
   402.......410.........420.........430.........440.........450.........460... ......470........
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Query Sequence  ARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGY. . . RMPQPPNCEPRLYEI
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Template Sequence  KERLGTA. . YYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL
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   219220..... ....230.... .....240.........250..... ....260.........270.........280.........290....
 
   479480.........490........
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Query Sequence  MLECWHKDPMRRPTFETLQW
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Template Sequence  IKQMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   295....300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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