Job Description Q9V9J3 Confidence 100.00% Date Tue Jan 22 11:49:10 GMT 2013 Rank 311 Aligned Residues 238 % Identity 26% Template c3coiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase 13; PDBTitle: crystal structure of p38delta kinase Resolution 2.09 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																														.																				.	.	.																												.	.
Query SS confidence																														.																				.	.	.																												.	.
Query Sequence		W	E	I	D	R	T	S	L	K	F	V	R	K	L	G	S	G	Q	F	G	D	V	W	E	G	L	W	N	.	N	T	T	P	V	A	I	K	T	L	K	S	G	T	M	D	P	K	D	.	.	.	F	L	A	E	A	Q	I	M	K	K	L	R	H	T	K	L	I	Q	L	Y	A	V	C	T	V	E	E	.	.
Query Conservation																														.																				.	.	.																												.	.
Alig confidence						.																								.																				.	.	.																												.	.
Template Conservation						.
Template Sequence		W	E	L	P	.	K	T	Y	V	S	P	T	H	V	G	S	G	A	Y	G	S	V	C	S	A	I	D	K	R	S	G	E	K	V	A	I	K	K	L	S	R	P	F	Q	S	E	I	F	A	K	R	A	Y	R	E	L	L	L	L	K	H	M	Q	H	E	N	V	I	G	L	L	D	V	F	T	P	A	S	S	L
Template Known Secondary structure						.	T	T											S	S									T	T	T	T									S	S	T	T	S	S																				T	T	B				S					S		S	S	G
Template Predicted Secondary structure						.
Template SS confidence
		19	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
						315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	I	Y	I	I	T	E	L	M	K	H	G	S	L	L	E	Y	L	Q	A	I	A	G	K	G	R	S	L	K	M	Q	T	L	I	D	M	A	A	Q	I	A	A	G	M	A	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	D	G	N	I	V	K	I	A	D	F	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		R	N	F	Y	D	F	Y	L	V	M	P	F	M	Q	T	D	L	Q	K	I	M	G	.	.	.	.	.	.	.	L	K	F	S	E	E	K	I	Q	Y	L	V	Y	Q	M	L	K	G	L	K	Y	I	H	S	A	G	V	V	H	R	D	L	K	P	G	N	L	A	V	N	E	D	C	E	L	K	I	L	D	F	G
Template Known Secondary structure		G	G												S			G	G	G	T	T	T	.	.	.	.	.	.	.	S																								T	T				S	S			G	G	G					T	T							S	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	A	R	L	I	K	E	D	E	Y	E	A	R	V	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	S	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	Y	G	R	I	P	Y	P	G	M	T	N	A	E	V	L	T	Q	V	E	H	G	Y	R	M	P	Q	P	.	.
Query Conservation																																																																																.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																	.																											.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		L	A	R	H	V	V	T	R	.	.	.	.	.	.	.	.	.	.	.	W	Y	R	A	P	E	V	I	L	S	W	M	H	Y	N	Q	T	V	D	I	W	S	V	G	C	I	M	A	E	M	L	T	.	G	K	T	L	F	K	G	K	D	Y	L	D	Q	L	T	Q	I	L	K	V	T	G	V	P	G	T	E	F
Template Known Secondary structure			T	T				S	B	.	.	.	.	.	.	.	.	.	.	.			S						S			S				T	T																.	S	S		S	S	B	S	S															B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		171	.	.	.	.	.	.	.												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
																														469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	C	E	P	R	L	Y	E	I	M	L	E	C	W	H	K	D	P	M	R	R	P	T	F	E	T	L	Q	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	K	L	N	D	K	A	A	K	S	Y	I	Q	S	L	P	Q	T	P	R	K	D	F	T	Q	L	F	P	R	A	S	P	Q	A	A	D	L	L	E	K	M	L	E	L	D	V	D	K	R	L	T	A	A	Q	A	L	T
Template Known Secondary structure			T	T		S										T	S		B		S	S			T	T	T	T		T	T	S												S		S		T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions