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Job DescriptionQ9V9J3
Confidence100.00%DateTue Jan 22 11:49:10 GMT 2013
Rank34Aligned Residues254
% Identity24%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIDRTSLKFVRKLGSGQFGDVWEGLWN. NTTPVAIKTLKSGT. . . . MDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPI
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL
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GGG
SSSTTT

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SS
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  YIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIK
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Template Sequence  CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK
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TTS
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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   397..400.........410.........420.........430.........440.........450 .........460.........470..
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Query Sequence  EDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGM. . . . TNAEVLTQVEHGYRMPQPPNCE
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Template Sequence  AGQTKTKGYAGTP. GFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKFS
Template Known Secondary structure  TT


B



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   341........350... ......360.........370.........380.... .....390.........400......... 410.......
 
   473......480.........490 ........
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Query Sequence  PRLYEIMLECWHKDPMRR. . . . . PTFETLQW
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Template Sequence  PASKDFCEALLQKDPEKRLGFRDGSCDGLRT
Template Known Secondary structure  S
SSGGGS


BTTBSTTGGG
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   418.420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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