283 c2vagA_ Probab=100.00  E-value=5.1e-39  Score=222.54  Aligned_columns=253  Identities=24%

Q ss_pred             CCCHHHEEEEECCCCCCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEECC
Q ss_conf             0167877772112437980799999779--9199999988531388999999999986499848------1286533118
Q batch____       242 EIDRTSLKFVRKLGSGQFGDVWEGLWNN--TTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKL------IQLYAVCTVE  313 (517)
Q Consensus       242 ei~~~~~~l~~~lG~G~fg~V~~~~~~~--~~~VAVK~l~~~~~~~~~f~~E~~~l~~l~Hpni------v~l~g~~~~~  313 (517)
                      ++-.++|++.++||+|+||.||+|+...  ++.||||+++.+....+.+++|+.+|+.++|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             82799997889874999987312567778999999999999999885203430201100134356766310113344045
Q batch____       314 EPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLAR  393 (517)
Q Consensus       314 ~~~~lv~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~~ia~gl~yLh~~~~ih~dl~~~nil~~~~~~~kl~Dfgls~  393 (517)
                      ..++++++++..+.+.....   .............+..++..++.++|...++|+|+++.|++++.++..++.||+.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~  165 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDER  165 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEE
T ss_pred             CEECCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCC
T ss_conf             00001221123675211122---211101365655555445555543110122223455415898578862000345433


Q ss_pred             EEECCCCEEEECC----------CCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC--
Q ss_conf             5212673122025----------5451007977994789874689999999999999488999987798999999980--
Q batch____       394 LIKEDEYEARVGA----------RFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEH--  461 (517)
Q Consensus       394 ~~~~~~~~~~~~~----------~~~~~~~aPE~l~~~~~s~ksDvwSfGvil~Ei~t~G~~P~~~~~~~e~~~~i~~--  461 (517)
                      ............+          .....+.+||......++.++|+|++|+++|++.+ ++.|+...+..+.+..+..  
T Consensus       166 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~  244 (330)
T c2vagA_         166 TLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERIL  244 (330)
T ss_dssp             EESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHC
T ss_conf             4444321000146633267542001210232100000111123542102258731004-889887589689999998513


Q ss_pred             -----------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             -----------------------------------------8998887468999999999873789678699999999
Q batch____       462 -----------------------------------------GYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQW  498 (517)
Q Consensus       462 -----------------------------------------g~~~~~p~~~p~~~~~li~~C~~~dP~~RPt~~~i~~  498 (517)
                                                               ......+..+++++.+||.+||+.||++|||+.+|++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         245 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             889988974420121235465665321000111001233310023565458999999999866588111776789967


