Job Description Q9V9J3 Confidence 100.00% Date Tue Jan 22 11:49:10 GMT 2013 Rank 216 Aligned Residues 228 % Identity 21% Template c2onlD_ PDB info PDB header:transferase Chain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer Resolution 4.00 Å

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		248	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320
Predicted Secondary structure													.											.																															.															.	.	.	.
Query SS confidence													.											.																															.															.	.	.	.
Query Sequence		L	K	F	V	R	K	L	G	S	G	Q	.	F	G	D	V	W	E	G	L	W	N	.	N	T	T	P	V	A	I	K	T	L	K	S	G	T	M	D	P	K	D	F	L	A	E	A	Q	I	M	K	K	L	.	R	H	T	K	L	I	Q	L	Y	A	V	C	T	V	.	.	.	.	E	E	P	I	Y	I	I	T
Query Conservation													.											.																															.															.	.	.	.
Alig confidence													.											.												.	.	.	.																.															.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		V	K	S	G	L	Q	I	K	K	N	A	I	I	D	D	V	L	Q	I	F	N	K	R	T	Q	E	K	F	A	L	K	M	L	Q	.	.	.	.	D	C	P	K	A	R	R	E	V	E	L	H	W	R	A	S	Q	C	P	H	I	V	R	I	V	D	V	Y	E	N	L	Y	A	G	R	K	C	L	L	I	V	M
Template Known Secondary structure									B		S			S									T	T	T											.	.	.	.		S												T	T			S	T	T	B												T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		E	L	M	K	H	G	S	L	L	E	Y	L	Q	A	I	A	G	K	G	R	S	L	K	M	Q	T	L	I	D	M	A	A	Q	I	A	A	G	M	A	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	D	.	.	.	G	N	I	V	K	I	A	D	F	G	L	A	R	L	I	K	E
Query Conservation																																																														.	.	.
Alig confidence																.	.																																													.	.	.
Template Conservation																.	.
Template Sequence		E	C	L	D	G	G	E	L	F	S	R	I	Q	D	.	.	R	G	D	Q	A	F	T	E	R	E	A	S	E	I	M	K	S	I	G	E	A	I	Q	Y	L	H	S	I	N	I	A	H	R	D	V	K	P	E	N	L	L	Y	T	S	K	R	P	N	A	I	L	K	L	T	D	F	G	F	A	K	E	T	T	S
Template Known Secondary structure						S									S	.	.		S	S				B																					T	T								G	G	G				S	S	S	S	T	T									S	S						S
Template Predicted Secondary structure																.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Y	E	A	R	V	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	S	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	Y	G	R	I	P	Y	P	G	M	T	N	A	E	V	L	T	Q	V	E	H	G	Y	R	M	P	Q	P	P	N	C	E	P	R	L	Y	E
Query Conservation
Alig confidence													.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	S	L	T	T	P	C	Y	T	P	.	.	Y	Y	V	A	P	E	V	L	G	P	E	K	Y	D	K	S	C	D	M	W	S	L	G	V	I	M	Y	I	L	L	C	.	G	Y	P	P	F	Y	E	F	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	W	S	E	V	S	E	E	V	K	M
Template Known Secondary structure								S	S			S	.	.	S	S							S	S	S																				T	.	S	S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T			S		T	T
Template Predicted Secondary structure													.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.														.	270	.	.	.	.	.	.	.	.	.	280
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	L	E	C	W	H	K	D	P	M	R	R	P	T	F	E	T	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	R	N	L	L	K	T	E	P	T	Q	R	M	T	I	T	E	F	M
Template Known Secondary structure						T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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