Job Description Q9V9J3 Confidence 99.80% Date Tue Jan 22 11:49:10 GMT 2013 Rank 381 Aligned Residues 116 % Identity 28% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P	S	N	Y	V	A	K	L	K	S	I	E	A	E	P	W	Y	F	R	K	I	K	R	I	E	A	E	K	K	L	L	L	P	E	N	E	H	G	A	F	L	I	R	D	S	E	S	R	H	N	D	Y	S	L	S	V	R	D	G	D	T	V	K	H	Y	R	I	R	Q	L	D	E	G	G	F	F	I	A
Query Conservation
Alig confidence																																		.	.																																						.
Template Conservation																																		.	.																																						.
Template Sequence		Y	F	Q	S	M	L	V	P	D	L	L	Q	I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	.	.	E	G	K	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	.	W	N	H	N	F	S	F	D
Template Known Secondary structure		S							T	T								T	T															.	.	T	T			T	T								S	S	T	T		S								T	T										.		T	T				S
Template Predicted Secondary structure																																		.	.																																						.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.
		193	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.																							.	.
Query SS confidence					.	.	.	.																							.	.
Query Sequence		R	R	T	.	.	.	.	T	F	R	T	L	Q	E	L	V	E	H	Y	S	K	D	S	D	G	L	C	V	N	.	.	L	C	K	P	C	V	Q	I	E	K	P	V	T	E
Query Conservation					.	.	.	.																							.	.
Alig confidence					.	.	.	.																							.	.
Template Conservation
Template Sequence		A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S	L	Q
Template Known Secondary structure		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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