Job Description Q9V9J3 Confidence 99.91% Date Tue Jan 22 11:49:10 GMT 2013 Rank 324 Aligned Residues 146 % Identity 15% Template c1zp9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rio1 kinase; PDBTitle: crystal structure of full-legnth a.fulgidus rio1 serine kinase bound2 to atp and mn2+ ions. Resolution 2.00 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.															.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	F	V	R	K	L	G	S	G	Q	F	G	D	V	W	E	G	L	W	N	N	T	T	P	V	.	.	.	A	I	K	T	L	K	S	G	T	M	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	F	L	A	E	A	Q	I	M	K	K	L	R	H	T	K	L	I	Q	L	Y	A	V	C
Query Conservation																												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	X	G	G	V	I	S	T	G	K	E	A	N	V	F	Y	A	D	G	V	F	D	G	K	P	V	A	X	A	V	K	I	Y	R	I	X	D	E	Y	L	Y	G	D	E	R	F	D	X	P	K	E	K	V	F	I	W	T	E	K	E	F	R	N	L	E	R	A	K	E	A	G	V	S	V	P	Q	P	Y	T
Template Known Secondary structure												S	S											T	T														G	G	G	T	T	T		T	T	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		T	V	E	E	P	I	Y	I	I	T	E	L	M	K	H	G	S	L	L	E	Y	L	Q	A	I	A	G	K	G	R	S	L	K	M	Q	T	L	I	D	M	A	A	Q	I	A	A	G	M	A	Y	L	.	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	D	G	N	I	V	K	I	A	D	F
Query Conservation																																																					.
Alig confidence						.	.																			.	.																										.																			.	.
Template Conservation						.	.																			.	.																																													.	.
Template Sequence		Y	X	K	N	.	.	V	L	L	X	E	F	I	G	E	D	E	L	P	A	P	T	L	V	.	.	E	L	G	R	E	L	K	E	L	D	V	E	G	I	F	N	D	V	V	E	N	V	K	R	L	Y	Q	E	A	E	L	V	H	A	D	L	S	E	Y	N	I	X	Y	I	.	.	D	K	V	Y	F	I	D	X
Template Known Secondary structure				T	T	.	.										T	T					B			.	.			G	G	G	G	G	G	S																			T	S					S	S		S	T	T	S				S	.	.	S	S
Template Predicted Secondary structure						.	.																			.	.																																													.	.
Template SS confidence
		140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.
		390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	R	L	I	K	E	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	A	V	T	L	R	H	P	X
Template Known Secondary structure		T	T				T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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