Job Description Q9V9J3 Confidence 100.00% Date Tue Jan 22 11:49:10 GMT 2013 Rank 279 Aligned Residues 247 % Identity 26% Template c1bl6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (map kinase p38); PDBTitle: the complex structure of the map kinase p38/sb216995 Resolution 2.50 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																														.																	.	.	.																													.	.	.	.
Query SS confidence																														.																	.	.	.																													.	.	.	.
Query Sequence		W	E	I	D	R	T	S	L	K	F	V	R	K	L	G	S	G	Q	F	G	D	V	W	E	G	L	W	N	.	N	T	T	P	V	A	I	K	T	L	K	S	G	T	M	D	.	.	.	P	K	D	F	L	A	E	A	Q	I	M	K	K	L	R	H	T	K	L	I	Q	L	Y	A	V	C	T	V	.	.	.	.
Query Conservation																														.																	.	.	.																													.	.	.	.
Alig confidence						.																								.																	.	.	.																													.	.	.	.
Template Conservation						.
Template Sequence		W	E	V	P	.	E	R	Y	Q	N	L	S	P	V	G	S	G	A	Y	G	S	V	C	A	A	F	D	T	K	T	G	L	R	V	A	V	K	K	L	S	R	P	F	Q	S	I	I	H	A	K	R	T	Y	R	E	L	R	L	L	K	H	M	K	H	E	N	V	I	G	L	L	D	V	F	T	P	A	R	S	L
Template Known Secondary structure						.	T	T											S	S									T	T	T										S	S	T	T	S	S																				T	T	B				S					S		S	S	T
Template Predicted Secondary structure						.
Template SS confidence
		18	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
				313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	E	P	I	Y	I	I	T	E	L	M	K	H	G	S	L	L	E	Y	L	Q	A	I	A	G	K	G	R	S	L	K	M	Q	T	L	I	D	M	A	A	Q	I	A	A	G	M	A	Y	L	E	S	Q	N	Y	I	H	R	D	L	A	A	R	N	V	L	V	G	D	G	N	I	V	K	I	A	D	F	G
Query Conservation		.	.
Alig confidence		.	.																					.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		E	E	F	N	D	V	Y	L	V	T	H	L	M	G	A	D	L	N	N	I	V	K	.	.	.	.	.	.	C	Q	K	L	T	D	D	H	V	Q	F	L	I	Y	Q	I	L	R	G	L	K	Y	I	H	S	A	D	I	I	H	R	D	L	K	P	S	N	L	A	V	N	E	D	C	E	L	K	I	L	D	F	G
Template Known Secondary structure		T	T																					.	.	.	.	.	.	T	S																								T	T								G	G	G					T	T									S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	A	R	L	I	K	E	D	E	Y	E	A	R	V	G	A	R	F	P	I	K	W	T	A	P	E	A	A	N	Y	S	K	F	S	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	V	T	Y	G	R	I	P	Y	P	G	M	T	N	A	E	V	L	T	Q	V	E	H	G	Y	R	M	P	Q	P	.	.
Query Conservation																																																																																.	.
Alig confidence																			.	.	.																																.																											.	.
Template Conservation																			.	.	.																																.
Template Sequence		L	A	R	H	T	D	D	E	M	T	G	Y	V	A	T	R	W	.	.	.	Y	R	A	P	E	I	M	L	N	W	M	H	Y	N	Q	T	V	D	I	W	S	V	G	C	I	M	A	E	L	L	T	.	G	R	T	L	F	P	G	T	D	H	I	D	Q	L	K	L	I	L	R	L	V	G	T	P	G	A	E	L
Template Known Secondary structure		S	S					S	S	S	S	S	S						.	.	.	T	S						T	T		S				T																	.	S	S		S				S	S
Template Predicted Secondary structure																			.	.	.																																.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
																														469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	C	E	P	R	L	Y	E	I	M	L	E	C	W	H	K	D	P	M	R	R	P	T	F	E	T	L	Q	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	K	I	S	S	E	S	A	R	N	Y	I	Q	S	L	T	Q	M	P	K	M	N	F	A	N	V	F	I	G	A	N	P	L	A	V	D	L	L	E	K	M	L	V	L	D	S	D	K	R	I	T	A	A	Q	A	L	A
Template Known Secondary structure			T	T											T	T	S								G	G	G	T	S	T	T													S		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions