Job Description Q9VPU1 Confidence 99.56% Date Tue Jan 22 11:34:19 GMT 2013 Rank 131 Aligned Residues 69 % Identity 35% Template c3jv3A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: structure of sh3e-dh unit of murine intersectin-1l Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

325

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330

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340

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350

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360

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370

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380

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390

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Predicted Secondary structure

Query SS confidence

Query Sequence

V

L

D

I

V

V

A

L

Y

S

F

T

S

N

N

D

Q

E

L

S

F

E

K

G

D

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L

E

I

V

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R

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A

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D

P

D

W

Y

K

A

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N

N

Q

G

Q

V

G

L

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N

Y

L

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E

L

N

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Y

L

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T

P

Y

R

N

A

S

Query Conservation

Alig confidence

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Template Conservation

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Template Sequence

G

S

C

Q

V

I

G

M

Y

D

Y

T

A

Q

N

D

D

E

L

A

F

S

K

G

Q

I

I

N

V

L

N

K

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E

D

P

D

W

W

K

G

E

V

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S

G

Q

V

G

L

F

P

S

N

Y

V

K

L

T

T

D

M

D

P

S

Q

Q

W

C

S

D

Template Known Secondary structure

S

S

B

S

S

T

T

B

B

T

T

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S

T

T

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T

T

G

G

G

G

G

G

S

T

T

Template Predicted Secondary structure

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Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions