Job Description Q9VPU1 Confidence 99.87% Date Tue Jan 22 11:34:19 GMT 2013 Rank 101 Aligned Residues 80 % Identity 21% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.					.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																														.																.	.	.	.
Query SS confidence																																														.																.	.	.	.
Query Sequence		K	S	W	Y	Y	G	A	I	T	R	S	Q	C	D	T	V	L	N	G	H	G	H	D	G	D	F	L	I	R	D	S	E	T	N	M	G	D	Y	S	V	S	L	K	A	.	P	G	R	N	K	H	F	R	V	H	V	E	Q	N	M	.	.	.	.	Y	C	I	G	Q	R	K	F	H	S	L	D	Q	L	V	D
Query Conservation																																														.																.	.	.	.
Alig confidence							.															.																								.																.	.	.	.
Template Conservation							.															.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	.	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V
Template Known Secondary structure			T	T	B		.												T	T	S	.		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure							.															.
Template SS confidence
		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		521	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	Q	R	A	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	L	Q	N	K	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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