Job Description Q9VPU1 Confidence 98.52% Date Tue Jan 22 11:34:19 GMT 2013 Rank 307 Aligned Residues 71 % Identity 25% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																												.	.	.	.	.
Query SS confidence																																				.	.	.	.	.																												.	.	.	.	.
Query Sequence		E	D	C	D	N	D	G	E	I	H	T	Y	A	M	A	E	N	V	L	D	I	V	V	A	L	Y	S	F	T	S	N	N	D	Q	.	.	.	.	.	E	L	S	F	E	K	G	D	R	L	E	I	V	D	R	P	A	S	D	P	D	W	Y	K	A	R	N	.	.	.	.	.	N	Q	G	Q	V	G	L	V	P
Query Conservation																																				.	.	.	.	.																												.	.	.	.	.
Alig confidence																																				.	.	.	.	.																.	.											.	.	.	.	.
Template Conservation																																																								.	.
Template Sequence		M	N	S	S	L	G	S	G	T	A	S	L	R	S	N	P	K	R	G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	.	.	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P
Template Known Secondary structure						S			T	T	T	T					S	S	S	S	S					S	S		B						S				S	S	B			B		T	T									.	.		S	S	S									S	S		T	T	S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.			.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		378	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		487	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions