Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VPU1
Confidence99.44%DateTue Jan 22 11:34:19 GMT 2013
Rank267Aligned Residues60
% Identity33%Templatec2lcsA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:nap1-binding protein 2; PDBTitle: yeast nbp2p sh3 domain in complex with a peptide from ste20p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   325....330.........340.........350.........360........ .370.........380......
Predicted Secondary structure 

























.














Query SS confidence 











































.

















Query Sequence  VLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARN. NQGQVGLVPRNYLQELND
Query Conservation        
          

    
    
         
     .  
  
  
   
     
Alig confidence 































..









.

















Template Conservation 
     

  
      


   

 
 

  ..    

       
  
  
  

     
Template Sequence  VNQRAVALYDFEPENDNELRLAEGDIVFISYK. . HGQGWLVAENESGSKTGLVPEEFVSYIQP
Template Known Secondary structure 

SS
B

SSTTB

B
TT
..TTT
TTSS
STT

S
Template Predicted Secondary structure 













..













Template SS confidence 






























































  
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions