Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VPU1
Confidence99.48%DateTue Jan 22 11:34:19 GMT 2013
Rank221Aligned Residues71
% Identity28%Templatec2jmcA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:spectrin alpha chain, brain and p41 peptide PDBTitle: chimer between spc-sh3 and p41
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  AQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQELS
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Template Sequence  AMGPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKE. . . . . . . . . . . LVLALYDYQESGDNAPS
Template Known Secondary structure 
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   2.......10.........20.........30.........40.........50... ......60.........70
 
   345.
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Query Sequence  FE
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Template Sequence  YS
Template Known Secondary structure  S
Template Predicted Secondary structure 

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   71.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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