Job Description Q9VPU1 Confidence 99.41% Date Tue Jan 22 11:34:19 GMT 2013 Rank 280 Aligned Residues 55 % Identity 20% Template c2j6kE_ PDB info PDB header:protein binding Chain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog) Resolution 2.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	L	Y	S	F	T	S	N	N	D	Q	E	L	S	F	E	K	G	D	R	L	E	I	V	D	R	P	A	S	D	P	D	W	Y	K	A	R	N	N	Q	G	Q	V	G	L	V	P	R	N	Y	L	Q	E	L	N
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		Y	I	V	E	Y	D	Y	D	A	V	H	D	D	E	L	T	I	R	V	G	E	I	I	R	N	V	K	K	.	.	L	Q	E	E	G	W	L	E	G	E	L	N	G	R	R	G	M	F	P	D	N	F	V	K	E	I	K
Template Known Secondary structure						S		B			S	S	T	T	B			B		T	T									.	.		S	S	T	T							T	T							G	G	G
Template Predicted Secondary structure																														.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions