Job Description Q9VPU1 Confidence 99.95% Date Tue Jan 22 11:34:19 GMT 2013 Rank 38 Aligned Residues 108 % Identity 22% Template c2el8A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:signal-transducing adaptor protein 2; PDBTitle: solution structure of the human stap2 sh2 domain Resolution UNK

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	G	Q	V	G	L	V	P	R	N	Y	L	Q	E	L	N	D	Y	L	A	T	P	Y	R	N	A	S	A	S	A	G	N	G	N	G	G	G	S	N	G	G	A	G	G	G	G	G	N	D	S	M	E	R	R	N	E	G	N	K	P	A	A	Q	S	S	G	Q	P	I	E	R	P	N	L	A	G	K	S	W
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	G	S	S	G	E	V	L	A	K	E	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	E	T	P	S
Template Known Secondary structure												S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S		T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.																																																											.	.	.	20	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.					.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.				.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																														.	.	.	.																				.	.	.
Query SS confidence																																														.	.	.	.																				.	.	.
Query Sequence		Y	Y	G	A	I	T	R	S	Q	C	D	T	V	L	N	G	H	G	H	D	G	D	F	L	I	R	D	S	E	T	N	M	G	D	Y	S	V	S	L	K	A	P	G	R	.	.	.	.	N	K	H	F	R	V	H	V	E	Q	N	M	Y	C	I	G	Q	R	K	.	.	.	F	H	S	L	D	Q	L	V	D	H
Query Conservation																																														.	.	.	.																				.	.	.
Alig confidence																																														.	.	.	.																				.	.	.
Template Conservation
Template Sequence		C	F	L	K	V	S	R	L	E	A	Q	L	L	L	E	R	Y	P	E	C	G	N	L	L	L	R	P	S	G	D	G	A	D	G	V	S	V	T	T	R	Q	M	H	N	G	T	H	V	V	R	H	Y	K	V	K	R	E	G	P	K	Y	V	I	D	V	E	Q	P	F	S	C	T	S	L	D	A	V	V	N	Y
Template Known Secondary structure		T																S	S	T	T		S	B							S	S	S	S	S									B	T	T	B								B			B	T	T	B			B	S	S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	A	P	I	Y	T	N	K	Q	G	E	K	L	Y	L	V
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		F	V	S	.	.	.	.	.	H	T	K	K	A	L	V	P	F	L
Template Known Secondary structure					.	.	.	.	.		S	S	S				B
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		104	.	.						.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions