Job Description Q9VPU1 Confidence 99.92% Date Tue Jan 22 11:34:19 GMT 2013 Rank 86 Aligned Residues 116 % Identity 20% Template c2cr4A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sh3 domain-binding protein 2; PDBTitle: solution structure of the sh2 domain of human sh3bp2 protein Resolution UNK

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		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	G	L	V	P	R	N	Y	L	Q	E	L	N	D	Y	L	A	T	P	Y	R	N	A	S	A	S	A	G	N	G	N	G	G	G	S	N	G	G	A	G	G	G	G	G	N	D	S	M	E	R	R	N	E	G	N	K	P	A	A	Q	S	S	G	Q	P	I	E	R	P	N	L	A	G	K	S	W	Y	Y
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	E	D	Y	E	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	P	N	S	V	F	V
Template Known Secondary structure													S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T	T	B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.																																																												.	.	.	.	.	.	20	.
		451	.	.	.	.	.	.	.	.	460	.	.						.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure														.	.	.	.	.																					.																										.
Query SS confidence														.	.	.	.	.																					.																										.
Query Sequence		G	A	I	T	R	S	Q	C	D	T	V	L	.	.	.	.	.	N	G	H	G	H	D	G	D	F	L	I	R	D	S	E	T	N	M	G	D	.	Y	S	V	S	L	K	A	P	G	R	N	K	H	F	R	V	H	V	E	Q	N	M	Y	C	I	.	G	Q	R	K	F	H	S	L	D	Q	L	V	D	H	Y	Q
Query Conservation														.	.	.	.	.																					.																										.
Alig confidence														.	.	.	.	.																					.																										.
Template Conservation
Template Sequence		N	T	T	E	S	C	E	V	E	R	L	F	K	A	T	S	P	R	G	E	P	Q	D	G	L	Y	C	I	R	N	S	S	T	K	S	G	K	V	L	V	V	W	D	E	T	S	N	K	V	R	N	Y	R	I	F	E	K	D	S	K	F	Y	L	E	G	E	V	L	F	V	S	V	G	S	M	V	E	H	Y	H
Template Known Secondary structure		S															S	T	T	S				T	T								S	S	T	T									T	T	T	T											T	T				S	S	S	S				S	S									T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	P	I	Y	T	N	K	Q	G	E	K	L	Y	L	V	R	S	L	P	K	A	N	G	T
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		T	H	V	L	.	.	.	P	S	H	Q	S	L	L	L	R	H	P	Y	G	Y	T	S	G	P
Template Known Secondary structure		T	S			.	.	.	S	S	S	S	S					S	B	S	S					T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		102	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions