Job Description Q9VPU1 Confidence 99.67% Date Tue Jan 22 11:34:19 GMT 2013 Rank 111 Aligned Residues 90 % Identity 37% Template c1wx6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cytoplasmic protein nck2; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck2 Resolution UNK

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	N	D	G	E	I	H	T	Y	A	M	A	E	N	V	L	D	I	V	V	A	L	Y	S	F	T	S	N	N	D	Q	E	L	S	F	E	K	G	D	R	L	E	I	V	D	R	P	A	S	D	P	D	W	Y	K	A	R	N	N	Q	G	Q	V	G	L	V	P	R	N	Y	L	Q	E	L	N	D	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	S	G	S	S	G	L	S	N	G	Q	G	S	R	V	L	H	V	V	Q	T	L	Y	P	F	S	S	V	T	E	E	E	L	N	F	E	K	G	E	T	M	E	V	I	E	K	P	E	N	D	P	E	W	W	K	C	K	N	A	R	G	Q	V	G	L	V	P	K	N	Y	V	V	V	L	S	D	G	P	A
Template Known Secondary structure														S										S	S					S	S	S	S	B					T	T										S	S		T	T							T	T								G	G	G							S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	Y	R	N	A	S	A	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	P	A	H	S	G	P	S	S
Template Known Secondary structure			S				S		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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