Job Description Q9VPU1 Confidence 99.95% Date Tue Jan 22 11:34:19 GMT 2013 Rank 47 Aligned Residues 163 % Identity 20% Template c1ng2A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	A	V	V	K	Y	N	Y	Q	A	Q	Q	P	D	E	L	S	L	T	K	G	T	R	I	L	I	L	E	K	S	N	D	G	W	W	R	G	Q	S	G	N	S	V	G	W	F	P	S	N	Y	T	T	E	D	C	D	N	D	G	E	I	H	T	Y	A	M	A	E	N	V	L	D	I	V	V	A	L	Y
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence		L	Q	T	Y	R	A	I	A	D	Y	E	K	T	S	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	E	K	S	E	S	G	W	W	F	C	Q	M	K	A	K	R	G	W	I	P	A	S	F	L	E	P	L	D	S	P	.	.	D	E	T	E	D	P	E	P	N	Y	A	G	E	P	Y	V	A	I	K
Template Known Secondary structure								S	S		B			S	S	T	T				B		T	T										T	T	S															G	G	G				S	S		S	.	.	S		S							T	T							S	S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	T	S	N	N	D	Q	E	L	S	F	E	K	G	D	R	L	E	I	V	D	R	P	A	S	D	P	D	W	Y	K	A	R	N	N	Q	G	Q	V	G	L	V	P	R	N	Y	L	Q	E	L	N	D	Y	L	A	T	P	Y	R	N	A	S	A	S	A	G	N	G	N	G	G	G	S	N	G	G	A	G	G
Query Conservation
Alig confidence																									.	.											.
Template Conservation																									.	.											.
Template Sequence		A	Y	T	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	.	.	L	L	D	G	W	W	V	I	R	K	.	D	D	V	T	G	Y	F	P	S	M	Y	L	Q	K	S	G	Q	D	V	S	Q	A	Q	R	Q	I	K	R	G	A	P	P	R	R	S	S	I	R	N	A	H	S	I	H
Template Known Secondary structure			B				S	T	T	B			B		T	T									.	.		T	T	S							.	T	T							G	G	G				T	T	S								T			S						G	G	G		S	S				S
Template Predicted Secondary structure																									.	.											.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		414	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	N	D	S	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	S	R	K	R	L	S
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions