Job Description Q9VPU1 Confidence 91.25% Date Tue Jan 22 11:34:19 GMT 2013 Rank 331 Aligned Residues 118 % Identity 19% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																							.	.	.															.																						.	.	.	.	.
Query SS confidence																							.	.	.															.																						.	.	.	.	.
Query Sequence		Q	A	Q	Q	P	D	E	L	S	L	T	K	G	T	R	I	L	I	L	E	K	.	.	.	S	N	D	G	W	W	R	G	Q	S	G	N	S	V	.	G	W	F	P	S	N	Y	T	T	E	D	C	D	N	D	G	E	I	H	T	Y	.	.	.	.	.	A	M	A	E	N	V	L	D	I	V	V	A	L	Y	S
Query Conservation																							.	.	.															.																						.	.	.	.	.
Alig confidence																							.	.	.															.																						.	.	.	.	.
Template Conservation
Template Sequence		G	A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	P	T	R	L	T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A
Template Known Secondary structure		T							G	G	G	G		S	S											S	S									T	T								T	T	T							G	G	G												T	T	T	T	T	S				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		F	T	S	N	N	D	Q	E	L	S	F	E	K	G	D	R	L	E	I	V	D	R	P	A	S	D	P	D	.	.	W	Y	K	A	R	N	N	Q	G	Q	V	G	L	V	P	R	N	Y	L	Q
Query Conservation																														.	.
Alig confidence																												.		.	.
Template Conservation																												.
Template Sequence		D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	.	G	Q	L	W	Y	R	I	R	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R
Template Known Secondary structure			G	G	G					G	G	G	S	T	T												T	.	T									S	S	S							G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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