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Job DescriptionQ9VPU1
Confidence98.11%DateTue Jan 22 11:34:19 GMT 2013
Rank310Aligned Residues97
% Identity22%Templatec1bg1A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470......... 480....... ..490.........500.........510........
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Query Sequence  LAGKSWYYGAITRSQCDTVLNGHGHDGDFLIRDSETN. MGDYSVSL. . . KAPGRNKHFRVHVEQNMYCIGQRKFHSLDQL
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Template Sequence  LWNEGYIMGFISKERERAILSTK. PPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEP. . . . YTKQQLNNMSFAEI
Template Known Secondary structure  SS


B


TTGGGTTTTTS.
TT
B

SS
SS





SSS
SS







....B
GGGGTSS
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   579580.........590.........600. ........610.........620.........630......... 640.........650...
 
   519520.........530.........540....
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Query Sequence  VDHYQRAPIYTNKQGEKLYLVRSLPK
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Template Conservation                           
Template Sequence  IMGYKIMDATNILVSPLVYLYPDIPK
Template Known Secondary structure  TTS


B
TTSSB



SSBTTTB
T
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   654.....660.........670.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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