Phyre 2 alignment of Q9VPU1 with c1x60A_

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Job Description | Q9VPU1
Confidence | 35.50% | Date | Tue Jan 22 11:34:19 GMT 2013
Rank | 370 | Aligned Residues | 23
% Identity | 22% | Template | c1x60A_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:sporulation-specific n-acetylmuramoyl-l-alanine | PDBTitle: solution structure of the peptidoglycan binding domain of2 b. subtilis cell wall lytic enzyme cwlc
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 454 | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |  |  | 470 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
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Query Sequence |  | T | R | S | Q | C | D | T | V | L | N | G | H | G | H | D | G | . | . | D | F | L | I | R | D | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | K | D | N | A | D | T | L | A | A | R | A | K | N | A | G | F | D | A | I | V | I | L | E | S
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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