Return to main results Retrieve Phyre Job Id

Job DescriptionQ9VYM1
Confidence46.26%DateTue Jan 22 11:43:10 GMT 2013
Rank124Aligned Residues39
% Identity26%Templated2h7ja1
SCOP infoCysteine proteinases Cysteine proteinases Papain-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1336...1340.........1350.........1360.........1370... ......1380.....
Predicted Secondary structure 



















.







Query SS confidence 





































.











Query Sequence  GSFLVRNCESTKQDYSLSLKGAKGFMHMRIQRNETGQY. ILGQFSRPFETV
Query Conservation                                        .            
Alig confidence 












.......




..










.





..



Template Conservation     






  
.......
  

..  

    
 


     .. 
  
Template Sequence  EYWLVKNSWGHNF. . . . . . . GEEGY. . IRMARNKGNHCGIASFPS. . YPEI
Template Known Secondary structure 
SB
TTS.......TBTT..
SSSSGGGTTTS
..
Template Predicted Secondary structure 





.......



..












..



Template SS confidence 


















































   178.180.........190 ..... ....200.........210... ....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions