Job Description Q9VYM1 Confidence 22.56% Date Tue Jan 22 11:43:10 GMT 2013 Rank 151 Aligned Residues 53 % Identity 19% Template d1o7fa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain Resolution 2.5

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		1291	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.					.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.			1340	.	.	.	.	.	.	.	.	.	1350	.	.
Predicted Secondary structure																													.	.	.	.																							.	.
Query SS confidence																													.	.	.	.																							.	.
Query Sequence		N	M	N	L	S	Q	G	Y	V	T	A	V	D	L	I	D	V	T	I	P	L	E	R	Q	G	W	Y	.	.	.	.	H	G	A	I	T	R	I	E	A	E	T	T	L	R	P	L	S	E	G	S	F	L	.	.	V	R	N	C	E	S	T	K	Q	D	Y	S	L
Query Conservation																													.	.	.	.																							.	.
Alig confidence																		.	.	.	.	.	.	.	.	.			.	.	.	.																							.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		H	L	K	T	Y	R	Q	C	C	V	G	T	E	L	V	D	.	.	.	.	.	.	.	.	.	W	M	I	Q	Q	T	S	C	V	H	S	R	T	Q	A	V	G	M	W	Q	V	L	L	E	D	G	V	L	N	H	V	D	Q	E	R	H	F	Q	D	K	Y	L	F
Template Known Secondary structure		S	S															.	.	.	.	.	.	.	.	.					S	S	S			S															T	T	S				S	S			S	S			S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.										.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions