 |
| Job Description | Q9VYM1 | | Confidence | 34.57% | Date | Tue Jan 22 11:43:10 GMT 2013 |
| Rank | 129 | Aligned Residues | 41 |
| % Identity | 22% | Template | c3r3tA_ |
| PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:30s ribosomal protein s6; |
PDBTitle: crystal structure of 30s ribosomal protein s from bacillus anthracis
|
| Resolution | 2.30 Å |
|
|   |   |
1364 | . | . | . | . | . | 1370 | . | . | . | . | . | . | . | . | . | 1380 | . | . | . | . | . | . | . | . | . | 1390 | . | . | . | . | . | . | . | . | . | 1400 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | I | Q | R | N | E | T | G | Q | Y | I | L | G | Q | F | S | R | P | F | E | T | V | P | E | M | I | R | H | F | C | L | N | R | L | P | V | R | G | A | E | H | M | C | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|
| . | . | . |   |
|   |
|
| Template Sequence |   |
E | I | N | D | L | R | E | G | F | Y | X | I | L | N | V | N | A | N | A | E | A | I | N | E | F | D | R | L | A | K | I | N | E | D | I | L | R | . |
. |
. |
H | I | V | V |
| Template Known Secondary structure |   |
|
|
|
|
|
|
| S |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|
| . | . | . |
|
|
|
|
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
. | . | 90 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|