Job Description Q9VYM1 Confidence 39.77% Date Tue Jan 22 11:43:10 GMT 2013 Rank 126 Aligned Residues 56 % Identity 34% Template c3p06A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:vp4 protein; PDBTitle: crystal structure of tellina virus 1 vp4 protease in the form of an2 intra-molecular(cis)acyl-enzyme complex. Resolution 2.10 Å

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		1331	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	S	E	G	S	F	L	V	R	N	C	E	S	T	K	Q	D	Y	S	L	S	L	K	G	A	K	G	F	M	H	M	R	I	Q	R	N	E	T	G	Q	Y	I	L	G	Q	F	S	R	P	F	E	T	V	P	E	M	I	R	H	F	C	L	N	R	L	P	V	R	G	A
Query Conservation
Alig confidence													.	.	.	.	.													.	.	.																.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.													.	.	.																.	.	.	.	.	.	.	.
Template Sequence		R	R	I	S	G	G	A	F	X	A	V	.	.	.	.	.	K	G	D	L	S	E	H	I	K	N	P	K	.	.	.	N	T	R	I	A	Q	T	V	A	G	G	T	I	Y	G	.	.	.	.	.	.	.	.	L	S	E	X	V	N	I	D	E	A	E	K	L	P	I	K	G	A
Template Known Secondary structure		T											.	.	.	.	.		S			G	G	G				T	T	.	.	.								T	T	S						.	.	.	.	.	.	.	.			T	T	S						T	T	S				S
Template Predicted Secondary structure													.	.	.	.	.													.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.						.	.	.	670	.	.	.	.	.	.	.	.				.	680	.	.	.	.	.	.	.	.	.	690	.	.	.									.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions