Job Description Q9VYM1 Confidence 23.73% Date Tue Jan 22 11:43:10 GMT 2013 Rank 147 Aligned Residues 59 % Identity 22% Template c3m45D_ PDB info PDB header:cell adhesion Chain: D: PDB Molecule:cell adhesion molecule 2; PDBTitle: crystal structure of ig1 domain of mouse syncam 2 Resolution 2.21 Å

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		1315	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	Y	H	G	A	I	T	R	I	E	A	E	T	T	L	R	P	L	S	E	G	S	F	L	V	R	N	C	E	S	T	K	Q	D	Y	S	L	S	L	K	G	A	K	G	F	M	H	M	R	I	Q	R	N	E	T	G	Q	Y	I	L	G	Q	F	S	R	P	F	E	T
Query Conservation
Alig confidence																																.	.	.										.	.	.	.	.	.	.	.
Template Conservation																																.	.	.										.	.	.	.	.	.	.	.
Template Sequence		Q	W	S	N	P	A	Q	Q	T	L	Y	F	D	D	K	K	A	L	R	D	N	R	I	E	L	V	R	A	S	W	.	.	.	H	E	L	S	I	S	V	S	D	.	.	.	.	.	.	.	.	V	S	L	S	D	E	G	Q	Y	T	C	S	L	F	T	M	P	V	K	T
Template Known Secondary structure						T	T							T	T				S			T	T							S	S	.	.	.	S								S	.	.	.	.	.	.	.	.			G	G	G											S	S
Template Predicted Secondary structure																																.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions