Job Description Q9VYM1 Confidence 24.00% Date Tue Jan 22 11:43:10 GMT 2013 Rank 144 Aligned Residues 93 % Identity 11% Template c3i8nB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp2912; PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633. Resolution 2.15 Å

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		1306	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.						.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		D	V	T	I	P	L	E	R	Q	G	W	Y	H	G	A	I	T	R	I	E	A	E	T	T	L	R	P	L	S	E	G	S	F	L	V	R	N	C	E	S	T	K	Q	D	Y	S	L	S	L	K	G	A	.	.	.	.	.	K	G	F	M	H	M	R	I	Q	R	N	E	T	G	Q	Y	I	L	G	Q	F	S	R
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.				.
Template Conservation																																																														.
Template Sequence		Q	V	X	T	P	R	P	V	V	F	R	V	D	A	T	X	T	I	N	E	F	L	D	K	H	K	D	T	P	F	S	R	P	L	V	Y	S	E	Q	K	D	N	I	I	G	F	V	H	R	L	E	L	F	K	X	Q	Q	S	G	S	.	G	Q	K	Q	L	G	A	V	X	R	P	I	Q	V	V	L	N	N	T
Template Known Secondary structure				S			G	G	G						T	T	S	B												T	T							S	S	S	T	T																	T	T	T	.	T	T	S	B	G	G	G	G		B							T	T	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		1381	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	E	T	V	P	E	M	I	R	H	F	C	L	N	R	L	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	P	K	V	F	D	Q	X	X	T	H	R	L	Q	L	A	L	V
Template Known Secondary structure		B											T	T		S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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