Job Description Q9VYM1 Confidence 99.72% Date Tue Jan 22 11:43:10 GMT 2013 Rank 83 Aligned Residues 106 % Identity 17% Template c2cr4A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sh3 domain-binding protein 2; PDBTitle: solution structure of the sh2 domain of human sh3bp2 protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.		1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		L	N	M	N	L	S	Q	G	Y	V	T	A	V	D	L	I	D	V	T	I	P	L	E	R	Q	G	W	Y	H	G	A	I	T	R	I	E	A	E	T	T	L	R	P	L	S	E	G	S	F	L	V	R	N	C	E	S	T	K	Q	D	.	Y	S	L	S	L	K	G	A	K	G	F	M	H	M	R	I	Q	R	N
Query Conservation																																																														.
Alig confidence										.	.	.	.	.																										.	.	.	.	.	.	.																.
Template Conservation										.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		E	K	V	P	L	P	N	S	.	.	.	.	.	V	F	V	N	T	T	E	S	C	E	V	E	R	L	F	K	A	T	S	P	R	G	E	P	Q	.	.	.	.	.	.	.	D	G	L	Y	C	I	R	N	S	S	T	K	S	G	K	V	L	V	V	W	D	E	T	S	N	K	V	R	N	Y	R	I	F	E	K
Template Known Secondary structure			S		S	S		T	T	.	.	.	.	.	T	B		S															S	T	T	S				.	.	.	.	.	.	.	T	T								S	S	T	T									T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		1369	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	Q	Y	I	L	G	Q	F	S	R	P	F	E	T	V	P	E	M	I	R	H	F	C	L	N	R	L	P	V	R	G	A	E	H	M	C	L	I	E	P	V
Query Conservation
Alig confidence											.	.																	.	.
Template Conservation											.	.																	.	.
Template Sequence		D	S	K	F	Y	L	E	G	E	.	.	V	L	F	V	S	V	G	S	M	V	E	H	Y	H	T	H	.	.	V	L	P	S	H	Q	S	L	L	L	R	H	P	Y
Template Known Secondary structure		T	T				S	S	S	S	.	.				S	S									T	T	S	.	.			S	S	S	S	S					S	B	S
Template Predicted Secondary structure											.	.																	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions