Job Description Q9VYM1 Confidence 37.04% Date Tue Jan 22 11:43:10 GMT 2013 Rank 128 Aligned Residues 39 % Identity 26% Template c1csbE_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: E: PDB Molecule:cathepsin b heavy chain; PDBTitle: crystal structure of cathepsin b inhibited with ca030 at 2.1 angstroms2 resolution: a basis for the design of specific epoxysuccinyl3 inhibitors Resolution 2.00 Å

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		1338	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	R	N	C	E	S	T	K	Q	D	Y	S	L	S	L	K	G	A	K	G	F	M	H	M	R	I	Q	R	N	E	T	G	Q	Y	I	L	G	Q	F	S	R	P	F	E	T	V	P	E	M
Query Conservation
Alig confidence													.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		W	L	V	A	N	S	W	N	T	D	W	.	.	.	.	.	.	.	G	D	N	G	F	F	K	I	L	R	G	Q	D	H	.	.	.	.	.	C	G	I	E	S	E	V	V	A	G	I	P	R	T
Template Known Secondary structure							S	S		T	T	S	.	.	.	.	.	.	.	T	B	T	T							S	S		G	.	.	.	.	.	G	G	T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions